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Homo sapiens

Cell lines

B cell lymphoma (mix of SUDHL-4, SUDHL-6, RCK8) ref: [BCLY]
Bone marrow endothelial cells (HBMEC) ref: [HBMEC]
Breast tumor epithelial cells (mix of T47D, MDA-MB-468, MCF7, BT20) ref: [HBEC]
Brown adipocytes (differentiated PAZ6) ref: [PZD]
Colon tumor epithelial cells (mix of Caco2, HCA7, Colo205, SW480) ref: [HCCA]
Colorectal carcinoma cells (HCT116) ref: [HCT116TO]
Ewing's sarcoma cells ref: [HSEG]
HeLa cells ref: [HeLa]
Lung tumor cells (mix of A549, H1703, H460) ref: [HLUC]
Podocytes ref: [HPO]
Pre-adipocytes (undifferentiated PAZ6) ref: [PZU]
Prostate tumor cells (mix of PC3, DU145, PNT1A, LNCaP) ref: [HPRC]
T-cells (CEMC7) ref: [CEMC7]
Umbilical vein endothelial Cells ref: [HUVEC]
Umbilical vein endothelial Cells, stressed & unstressed (HUVEC) ref: [HSCUV]
HeLa MBmate NubG-x
Hep-G2 (hepatocellular carcinoma) MBmate NubG-x
Jurkat T-cells MBmate NubG-x
LNCaP (prostate adenocarcinoma cells) MBmate NubG-x
Mammary epithelial cells MBmate NubG-x

Primary Cells

Fibroblasts ref: [HF]
Hepatocytes ref: [PHH]
Leukocytes + activated mononuclear cells ref: [HLMA]
Macrophages (mix of Pam3CSK4 induced and IFNß induced) ref: [HMIN]
Macrophages (non induced) ref: [MAC]
Melanocytes ref: [HML]
Thymocytes (mix of CD4+ and CD8+) ref: [HTH]
Bone marrow-derived hematopoietic stem cells ref: [BMHSC]

Tissues

Brain adult ref: [HBR]
Brain fetal (entorhinal cortex and hippocampus) ref: [HFHIT]
Brain fetal ref: [HFBR]
Breast ref: [HBT]
Colon ref: [HCN]
Heart adult/fetal ref: [HVEH]
Langerhans islets ref: [HISL]
Liver ref: [HLV]
Lung ref: [HNL]
Muscle skeletal adult/fetal ref: [HMAF]
Pancreas ref: [HPS]
Placenta ref: [PLA]
Reconstituted skin (Episkin) ref: [EpiSkin]
Retina ref: [HRET]
Testis ref: [HTestis]
Brain Adult MBmate NubG-x
Brain Embryo MBmate NubG-x
Colon Adult MBmate NubG-x
Kidney Adult MBmate NubG-x
Liver Adult MBmate NubG-x
Lung Adult MBmate NubG-x
Small intestine Adult MBmate NubG-x

Plants

Arabidopsis thaliana

Tissues

Flower ref: [ATFO]
Meiotic bud ref: [ATMB]
Mixed leaves, TYMV infected, flg22 infiltrated ref: [AIFT]
Organ boundary cells of inflorescence ref: [ATOBC]
Rosette leaf, P. syringae infected ref: [AIPS]
Seedling (one-week old) ref: [ATH]
Seedlings (6 days, dark grown & light exposed) MBmate NubG-x

Barley (Hordeum vulgare)

Tissues

7-day old seedling leaf, Blumeria graminis f. sp. Hordei infected ref: [HVMI]
Seedling leaves ref: [HVSLT]

Brachypodium distachyon

Tissues

Root and shoot ref: [BMDN]

Corn (Zea mays)

Tissues

Endosperm ref: [ZMEN]
Immature ear and tassel inflorescence primordia, vegetative apices ref: [MAET]
Kernel ref: [ZEMAK]
Leaf and ovary ref: [MALO]

Grape (Vitis riparia)

Tissues

Leaf ref: [VIRIF]

Kalanchoe laxiflora

Tissues

Leaf ref: [KALAX]

Marchantia polymorpha

Tissues

Mixed tissues ref: [MAPA]

Medicago truncatula

Tissues

Root ref: [METRO]
Root, A. euteiches infected ref: [MOTA]
Whole plant and root, A. euteiches infected ref: [MTA17]
Medicago truncatula roots mycorrhized ref: [MTRMY]
Nodules MBmate NubG-x

Melon (Cucumis melo)

Tissues

Meristem ref: [CUMM]

Morning glory (Ipomoea nil)

Tissues

Petal ref: [IPON]

Nicotiana benthamiana

Tissues

Mixed tissues ref: [NIB]

Orange (Citrus sinensis)

Tissues

Plant, Las infected ref: [CSIL]

Pea (Pisum sativum)

Tissues

Leaf and stem, ref. [PSLS]

Physcomitrella patens

Tissues

Protonema and gametophores ref: [PHPA]

Poplar (Populus tremula )

Tissues

L. x Populus tremuloides (Leaves and Buds) ref: [ASLB]

Rapeseed (Brassica napus)

Tissues

Leaf, Leptosphaeria maculans infected ref: [BNLI]

Rice (Oryza sativa)

Tissues

Leaf and root ref: [RLR]
Roots and Nodes MBmate NubG-x

Setaria viridis

Tissues

Whole plant ref: [SVIN]

Soybean (Glycine max)

Tissues

Leaf and root, water stressed ref: [GMLR]
Leaf, shoot, root, B. japonicum inoculated ref: [SSRL]

Tobacco (Nicotiana tabacum)

Tissues

Leaf ref: [NITA]

Tomato (Solanum lycopersicum)

Tissues

Fruit ref: [TOFT]
Leaf, petiole, stem and root, TYLCV infected ref: [TOPLI]
Leaf, stem and petiole ref: [TOLE]
Meristem, leaf primordia and stem, floral bud ref: [TOM]
Ovary ref: [TOV]
Root, R. solanacaerarum and M. incognita infected ref: [TORI]

Wheat (Triticum aestivum)

Tissues

Head, leaf and root ref: [WHLR]
Leaf, Zymoseptoria tritici inoculated ref: [WLIZT]
Leaves, infected with powdery mildew and wheat leaf rust ref: [TALSI]
Triticum turgidum (Leaf, peduncle and grain) ref: [TTLPG]
Wheat infected with Fusarium graminearum ref: [WIFG]
Triticum aestivum Cadenza, non-infected and infected with wheat stem rust ref: [TAC]

Vitis rotundifolia

Tissues

Vitis rotundifolia Fruit ref: [MURAF]

Rodents

Mouse (Mus musculus)

Tissues

Brain adult ref: [AMB]
Brain embryo (mix of E10.5 and E12.5) ref: [MBE]
Brain embryo (mix of E14, E16 and E18) ref: [MB6E]
Mus musculus whole cochlea ref: [MCOC]
Embryonic stem cells (treated with CHIR and bFGF) ref: [MSCT]
Embryonic stem cells ref: [MESC]
Inner Ear E16.5 ref: [MOINE]
Inner Ear ref: [MIE]
Kidney adult ref: [MKI]
Kidney embryo ref: [MOKE]
Neurosphere adult ref: [MANE]
Ovary ref: [MMO]
Pancreatic beta-cells ref: [MPC]
Spleen ref: [MSPL]
Testis ref: [MUST]
Corti Organ ref: [MMCO]
Mouse Postnatal day 7 lungs ref: [MMPLG]
Mus musculus whole cochlea ref: [MCOC]
Brain Adult MBmate NubG-x
Embryo (11 days) MBmate NubG-x
Heart Adult MBmate NubG-x
Kidney Adult MBmate NubG-x
Testis Adult MBmate NubG-x

Rat (Rattus norvegicus)

Tissues

Hippocampus ref: [RHC]
Rear brain ref: [RBP]
Neonatal Cardiomyocytes MBmate NubG-x

Insects

Drosophila melanogaster

Tissues

Adult head ref: [DMT]
Embryo (0-12h and 12-24h) ref: [DME]
Larvae brain ref: [DMLB]
Ovary ref: [DMOV]
Testis ref: [DMTES]
Third instar larvae ref: [DLTS]

Tiger mosquito (Aedes albopictus)

Tissues

Larvae cells ref: [AALC]

Green peach aphid

Cells

Myzus persicae ref: [MYPE]

Nasonia vitripennis

Tissues

Ovary and Testis ref: [NVOT]

Other Model Organisms

Caenorhabditis elegans

Tissues

Embryo ref: [CEE]
Mixed stages ref: [CEMS]
Adult MBmate NubG-x
Eggs MBmate NubG-x

Dictyostelium discoideum

Tissues

Vegetative, aggregative & slug stages ref: [DD]
Whole cell MBmate NubG-x

Gallus gallus

Tissues

Lung ref: [GALU]

Xenopus laevis

Tissues

Embryo ref: [XLE]

Fungi

Cells

Magnaporthe oryzae ref: [MAOR]
Botrytis cinerea strain BO5.10 ref: [BOCI]

Parasites

Toxoplasma gondii

Cells

Strain wild-type RH ref: [TGRH]

Trypanosoma brucei (genomic library)

Cells

Strain TREU927 ref: [TB]

Wheat Curl Mite

Cells

Aceria tosichella ref: [WCM]

Schistosoma mansoni

Cells

Whole Organism ref: [SMAN]

Bacteria (genomic library)

Caulobacter crescentus

Cells

Strain NA 1000 ref: [CACR]

Enterococcus faecalis

Cells

Strain V583 ref: [ENFA]

Escherichia coli

Cells

Strain K-12 MG1655 ref: [EC]

Helicobacter pylori

Cells

Strain 26695 ref: [HP]

Mycobacterium tuberculosis

Cells

Strain H37Rv ref: [MYT]

Pseudomonas aeruginosa

Cells

Strain PAO1 ref: [PSAE]

Staphylococcus aureus

Cells

Strain COL ref: [Sa]

Streptococcus pneumoniae

Cells

Strain G1 type 4 ref: [Sp]

Streptococcus pyogenes

Cells

Strain M5 Manfredo ref: [SCPY]
Strain SF370 ref: [SP370]

Clostridium difficile

Cells

Clostridioides difficile CD196 ref: [CD196]

Acinetobacter baumanii

Cells

Strain ATCC_17978 ref: [ACIBA]

Fish

Medaka (Oryzias latipes)

Tissues

Embryo ref: [OLE]

Rainbow trout (Oncorhynchus mykiss)

Tissues

Embryonic male gonads ref: [ONMY]

Zebrafish (Danio rerio)

Tissues

Embryo ref: [ZFE]

Green Algae

Chlamydomonas reinhardtii

Cells

Strain CC-124 ref: [CHRE]

Mesotaenium endlicherianum

Tissues

Meso endlicherianum vegetative cells ref: [MEVE]

Yeast

Candida albicans (genomic library)

Cells

Strain SC5314 ref: [CANA]

Saccharomyces cerevisiae (genomic library)

Cells

Strain YM955 ref: [SaC]
Whole cell MBmate NubG-x

Schizosaccharomyces pombe (cDNA library)

Cells

S. pombe ref: [SAPO]

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